This collection features several string sorting algorithm implementations, that have been tuned to take better advantage of modern hardware. Classic implementations tend to optimize instruction counts, but when sorting large collections of strings, we also need to focus on memory issues. All algorithms are implemented using C and C++.
Technical details:
- All of the implementations sort the strings by raw byte values. This means that they are mainly intended for research use.
- Includes several variants of known and efficient (string) sorting algorithms, such as MSD radix sort, burstsort and multi-key-quicksort.
- Emphasis on reducing cache misses and memory stalls.
- Includes the tools to create a HTML report, that can be used to compare the provided implementations. The report includes details such as TLB, L1 and L2 cache misses, run times and memory peak usage.
- Supports Linux huge pages. For more information, see below.
MIT.
Exception: The directory external contains files, that are included for
reference purposes, that may or may not be compatible with the MIT license.
Copyright © 2007-2012 by Tommi Rantala tt.rantala@gmail.com
The directory external contains files, that are included for reference
purposes, and are copyright by their respective authors.
- C++17
- CMake >= 3.16
- OpenMP
- Ninja (optional; the default Make generator also works)
Default compilation with GCC:
$ git clone https://github.com/rantala/string-sorting.git
$ cd string-sorting
$ cmake -B build -G Ninja && ninja -C build
$ ./build/sortstring
Use a separate debug build for easier debugging:
$ cmake -B build-debug -G Ninja -DCMAKE_BUILD_TYPE=Debug && ninja -C build-debug
The build can be configured to run the GCC static analyzer (-fanalyzer) on
the project's own sources. Third-party code under external/ is excluded.
$ cmake -B build-gcc-analyzer -G Ninja -DENABLE_GCC_ANALYZER=ON && ninja -C build-gcc-analyzer
The option requires GCC >= 13 for both C and C++; configuration fails fast with any other compiler or older version. Analyzer diagnostics are emitted as build warnings; the build still succeeds. Expect significantly longer compile times when the option is enabled.
The build can also be configured to run the Clang static analyzer via
clang-tidy, scoped to the clang-analyzer-* check group. Third-party code
under external/ is excluded.
$ cmake -B build-clang-analyzer -G Ninja -DENABLE_CLANG_ANALYZER=ON && ninja -C build-clang-analyzer
The option requires clang-tidy on PATH (Ubuntu: apt install clang-tidy);
configuration fails fast if it is not found. Diagnostics appear inline like
compiler warnings and the build still succeeds. The configured C/C++ compiler
does not need to be Clang. ENABLE_GCC_ANALYZER and ENABLE_CLANG_ANALYZER
can be combined when building with GCC >= 13.
The compiler -march= value can be overridden via the MARCH cache
variable (default native):
$ cmake -B build-v3 -G Ninja -DMARCH=x86-64-v3 && ninja -C build-v3
Useful for targeting a portable ISA level or restricting the instructions emitted by the compiler.
The default page size on many computer architectures is 4 kilobytes. When working with large data sets, this means that the input is spread to thousands of memory pages. Unfortunately random access in thousands of pages can be slow (see e.g. http://en.wikipedia.org/wiki/Translation_lookaside_buffer).
To alleviate this exact problem, many architectures have support for larger page size. For example modern x86 has support for 2/4 megabyte "huge pages". With such large pages, even large data sets fit into a much smaller amount of memory pages.
In this program, support for huge pages is enabled using either --hugetlb-text or --hugetlb-ptrs, or both. The former option places the input data (i.e. the actual strings from the given file) into huge pages, and the latter option places the string pointer array into huge pages. Using huge pages in Linux requires CPU support, and properly adjusted kernel settings.
The external library libhugetlbfs (https://github.com/libhugetlbfs/libhugetlbfs) can be used to replace all calls to malloc to use huge pages. If this library is used, the aforementioned options are not needed.
Requirements:
- OProfile for most measurements, probably also requires root privileges.
- The default settings use Intel Core 2 specific events. When profiling on other platforms, you will most likely need to modify the scripts in the report/ directory.
- /usr/bin/memusage for measuring the memory peak usage. This is a GNU libc utility.