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senyafred/README.md

Hi, I'm Frederick Senya πŸ‘‹

PhD Candidate in Mathematical Sciences @ University of Vermont Β· Computational & data modeler Β· Mathematics educator

I build mathematical models for real-world problems in biology, public health, and clinical data β€” then make the results clear to whoever needs them. First-author published, with 4+ years teaching university-level mathematics.

πŸ“ San Jose, CA Β· πŸ“« senyafrederick@gmail.com Β· πŸ”— LinkedIn


πŸ”¬ What I work on

  • Mathematical modeling β€” differential equations, reaction-diffusion PDEs, flux-balance analysis, compartmental (disease) models
  • Statistical & data analysis β€” Bayesian inference, time-series, regression, predictive modeling, anomaly detection
  • Reproducible scientific computing β€” documented, validated, publication-quality workflows

πŸ“„ Selected work

  • First-author publication β€” Equation-Based Integration of Flux Balance Analysis with Diffusion for Spatio-Temporal Simulation of Microbial Communities. Senya et al., 2026, bioRxiv
  • COMETS β€” recognized contributor to Computation of Microbial Ecosystems in Time and Space (open-source scientific software), 2025
  • CKD risk modeling β€” co-authored predictive model risk-stratifying chronic kidney disease patients by stage degeneration (presented at SIAM)

🧰 Tech & tools

Python R MATLAB NumPy SciPy pandas Jupyter LaTeX Git

πŸŽ“ Also an educator

4+ years teaching Algebra through Calculus II and Modern Mathematics β€” 45–51 students per section, rated 4.4–4.8/5 for building an inclusive, student-centered classroom. I care about making hard quantitative ideas land for everyone, not just the few who arrive confident.


Popular repositories Loading

  1. senyafred.github.io senyafred.github.io Public

    Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

    JavaScript

  2. CV CV Public

    HTML

  3. MaTLAB-CODES MaTLAB-CODES Public

    MATLAB CODES

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  4. comets comets Public

    Forked from segrelab/comets

    Computation of Microbial Ecosystems in Time and Space

    Java

  5. senyafred senyafred Public

  6. github-chapter-2-sandbox github-chapter-2-sandbox Public

    Forked from codedex-io/github-chapter-2-sandbox

    Intended for exercises 6-10 in Chapter 2 of CodΓ©dex's Git/GitHub course